Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 AHCYP2-201ENST00000430630 1300 ntBASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00346Q8IVM7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00346Q8IVM7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00346Q8IVM7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00346Q8IVM7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AL022313.4-201ENST00000562756 2046 ntBASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AC112492.5-201ENST00000421897 457 ntBASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 NME2P1-201ENST00000426182 414 ntBASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AL161932.2-201ENST00000435436 679 ntBASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AL035414.1-201ENST00000451327 857 ntBASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 ZACNP1-201ENST00000612259 710 ntBASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AGAP10P-201ENST00000454844 2418 ntBASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 PDIA3P1-201ENST00000471856 1510 ntBASIC12.83□□□□□ -0.36
LINC00346Q8IVM7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 AC023794.5-201ENST00000564380 2157 ntBASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 MIR326-201ENST00000362220 95 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms