Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 AC007541.1-201ENST00000570282 1469 ntBASIC12.73□□□□□ -0.37
C11orf88Q6PI97 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 AZGP1P1-201ENST00000411909 902 ntBASIC12.73□□□□□ -0.37
C11orf88Q6PI97 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 TMEM198B-204ENST00000484016 896 ntBASIC12.73□□□□□ -0.37
C11orf88Q6PI97 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 AP005018.1-201ENST00000525475 301 ntBASIC12.73□□□□□ -0.37
C11orf88Q6PI97 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 AC008738.7-201ENST00000609744 511 ntBASIC12.73□□□□□ -0.37
C11orf88Q6PI97 INE2-201ENST00000630399 1874 ntBASIC12.73□□□□□ -0.37
C11orf88Q6PI97 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
C11orf88Q6PI97 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 COX5BP8-201ENST00000416911 349 ntBASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AC114501.2-201ENST00000439631 535 ntBASIC12.72□□□□□ -0.37
C11orf88Q6PI97 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AC055876.2-201ENST00000531834 546 ntBASIC12.72□□□□□ -0.37
C11orf88Q6PI97 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AC010336.2-201ENST00000564226 506 ntBASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.72□□□□□ -0.37
C11orf88Q6PI97 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms