Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 AC018638.5-201ENST00000450885 754 ntBASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 AC084752.1-201ENST00000509766 622 ntBASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 RNA5SP406-201ENST00000516106 112 ntBASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 AC002044.2-201ENST00000624910 970 ntBASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 LINC02486-201ENST00000604157 3000 ntBASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 AC098934.1-203ENST00000442868 1262 ntBASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 CHCHD2P2-201ENST00000503744 321 ntBASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 AC093826.1-201ENST00000508655 993 ntBASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 AL596257.1-201ENST00000641463 2694 ntBASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.64■□□□□ 0.25
SHROOM1Q2M3G4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 KRT8P43-201ENST00000406052 1458 ntBASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 RNVU1-8-201ENST00000364272 125 ntBASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 AC092638.2-201ENST00000441105 947 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms