Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 AC024681.1-201ENST00000521917 487 ntBASIC18.63■□□□□ 0.57
CCDC27Q2M243 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 PHBP15-201ENST00000574228 665 ntBASIC18.63■□□□□ 0.57
CCDC27Q2M243 RN7SL455P-201ENST00000580629 282 ntBASIC18.63■□□□□ 0.57
CCDC27Q2M243 KRT18P8-201ENST00000581937 1246 ntBASIC18.63■□□□□ 0.57
CCDC27Q2M243 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC27Q2M243 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC27Q2M243 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 GOLGA8IP-202ENST00000611635 2100 ntBASIC18.62■□□□□ 0.57
CCDC27Q2M243 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 AC006335.1-201ENST00000445200 547 ntBASIC18.62■□□□□ 0.57
CCDC27Q2M243 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 AC090857.1-201ENST00000527400 390 ntBASIC18.62■□□□□ 0.57
CCDC27Q2M243 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 MIR3619-201ENST00000579667 83 ntBASIC18.62■□□□□ 0.57
CCDC27Q2M243 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 AC091544.8-201ENST00000619490 361 ntBASIC18.62■□□□□ 0.57
CCDC27Q2M243 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC27Q2M243 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC27Q2M243 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 AL928654.5-201ENST00000624831 2501 ntBASIC18.61■□□□□ 0.57
CCDC27Q2M243 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC27Q2M243 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 BANF1P3-201ENST00000412556 261 ntBASIC18.61■□□□□ 0.57
CCDC27Q2M243 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 PDIA3P2-201ENST00000428073 158 ntBASIC18.61■□□□□ 0.57
CCDC27Q2M243 AC073150.1-201ENST00000450406 1084 ntBASIC18.61■□□□□ 0.57
CCDC27Q2M243 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC27Q2M243 ACTG1P17-201ENST00000558391 1119 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms