Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC136604.1-202ENST00000425471 771 ntBASIC17.57■□□□□ 0.4
DDR1Q08345 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC17.57■□□□□ 0.4
DDR1Q08345 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.57■□□□□ 0.4
DDR1Q08345 RN7SL351P-201ENST00000469306 248 ntBASIC17.57■□□□□ 0.4
DDR1Q08345 AC091304.3-201ENST00000566500 716 ntBASIC17.57■□□□□ 0.4
DDR1Q08345 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.57■□□□□ 0.4
DDR1Q08345 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
DDR1Q08345 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.57■□□□□ 0.4
DDR1Q08345 AL049840.2-201ENST00000602722 535 ntBASIC17.57■□□□□ 0.4
DDR1Q08345 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.57■□□□□ 0.4
DDR1Q08345 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
DDR1Q08345 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.57■□□□□ 0.4
DDR1Q08345 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.56■□□□□ 0.4
DDR1Q08345 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 AC015909.5-201ENST00000624336 2266 ntBASIC17.56■□□□□ 0.4
DDR1Q08345 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.56■□□□□ 0.4
DDR1Q08345 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
DDR1Q08345 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 SHMT1P1-201ENST00000419974 1312 ntBASIC17.56■□□□□ 0.4
DDR1Q08345 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC17.56■□□□□ 0.4
DDR1Q08345 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.56■□□□□ 0.4
DDR1Q08345 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DDR1Q08345 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DDR1Q08345 ABCD1P4-201ENST00000399687 604 ntBASIC17.56■□□□□ 0.4
DDR1Q08345 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 EEF1DP2-201ENST00000433698 843 ntBASIC17.56■□□□□ 0.4
DDR1Q08345 ZNF877P-201ENST00000437614 612 ntBASIC17.56■□□□□ 0.4
DDR1Q08345 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.56■□□□□ 0.4
DDR1Q08345 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.56■□□□□ 0.4
DDR1Q08345 AC120498.7-201ENST00000562876 330 ntBASIC17.56■□□□□ 0.4
DDR1Q08345 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.56■□□□□ 0.4
DDR1Q08345 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
DDR1Q08345 AC006116.2-201ENST00000589958 988 ntBASIC17.56■□□□□ 0.4
DDR1Q08345 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.56■□□□□ 0.4
DDR1Q08345 AL591424.3-201ENST00000614278 872 ntBASIC17.56■□□□□ 0.4
DDR1Q08345 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DDR1Q08345 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
DDR1Q08345 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
DDR1Q08345 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DDR1Q08345 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
DDR1Q08345 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DDR1Q08345 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDR1Q08345 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.55■□□□□ 0.4
DDR1Q08345 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DDR1Q08345 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 WASH7P-201ENST00000488147 1351 ntBASIC17.55■□□□□ 0.4
DDR1Q08345 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
DDR1Q08345 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.55■□□□□ 0.4
DDR1Q08345 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.55■□□□□ 0.4
DDR1Q08345 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
DDR1Q08345 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 AC103592.1-201ENST00000394513 664 ntBASIC17.55■□□□□ 0.4
DDR1Q08345 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC17.55■□□□□ 0.4
DDR1Q08345 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.55■□□□□ 0.4
DDR1Q08345 KRT8P30-201ENST00000432100 650 ntBASIC17.55■□□□□ 0.4
DDR1Q08345 SOD2-205ENST00000444946 917 ntTSL 2 BASIC17.55■□□□□ 0.4
DDR1Q08345 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC17.55■□□□□ 0.4
DDR1Q08345 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.55■□□□□ 0.4
DDR1Q08345 MIR2278-201ENST00000516344 96 ntBASIC17.55■□□□□ 0.4
DDR1Q08345 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC17.55■□□□□ 0.4
DDR1Q08345 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC17.55■□□□□ 0.4
DDR1Q08345 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC17.55■□□□□ 0.4
DDR1Q08345 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms