Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.57■□□□□ 0.56
COL16A1Q07092 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL16A1Q07092 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL16A1Q07092 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.56■□□□□ 0.56
COL16A1Q07092 IMPDH1P5-201ENST00000439688 1540 ntBASIC18.56■□□□□ 0.56
COL16A1Q07092 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
COL16A1Q07092 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 AC131235.2-201ENST00000445553 1057 ntBASIC18.56■□□□□ 0.56
COL16A1Q07092 IGHV7-56-201ENST00000518372 351 ntBASIC18.56■□□□□ 0.56
COL16A1Q07092 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COL16A1Q07092 BCAR1P1-201ENST00000553953 636 ntBASIC18.56■□□□□ 0.56
COL16A1Q07092 RAB42P1-201ENST00000555078 316 ntBASIC18.56■□□□□ 0.56
COL16A1Q07092 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC18.56■□□□□ 0.56
COL16A1Q07092 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COL16A1Q07092 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC18.56■□□□□ 0.56
COL16A1Q07092 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL16A1Q07092 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC18.56■□□□□ 0.56
COL16A1Q07092 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC18.56■□□□□ 0.56
COL16A1Q07092 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.56■□□□□ 0.56
COL16A1Q07092 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.56■□□□□ 0.56
COL16A1Q07092 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.56■□□□□ 0.56
COL16A1Q07092 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 RNA5SP84-201ENST00000364740 107 ntBASIC18.56■□□□□ 0.56
COL16A1Q07092 AC012066.1-201ENST00000439252 694 ntBASIC18.56■□□□□ 0.56
COL16A1Q07092 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC18.56■□□□□ 0.56
COL16A1Q07092 ATP5G1P7-201ENST00000444398 400 ntBASIC18.56■□□□□ 0.56
COL16A1Q07092 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC18.56■□□□□ 0.56
COL16A1Q07092 TULP3P1-202ENST00000453253 1291 ntBASIC18.56■□□□□ 0.56
COL16A1Q07092 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC18.56■□□□□ 0.56
COL16A1Q07092 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC18.56■□□□□ 0.56
COL16A1Q07092 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC18.56■□□□□ 0.56
COL16A1Q07092 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL16A1Q07092 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC18.56■□□□□ 0.56
COL16A1Q07092 AC112702.1-201ENST00000623712 366 ntBASIC18.56■□□□□ 0.56
COL16A1Q07092 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.55■□□□□ 0.56
COL16A1Q07092 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COL16A1Q07092 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC18.55■□□□□ 0.56
COL16A1Q07092 HMGN1P4-201ENST00000419500 290 ntBASIC18.55■□□□□ 0.56
COL16A1Q07092 HNRNPA1P68-201ENST00000425806 979 ntBASIC18.55■□□□□ 0.56
COL16A1Q07092 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC18.55■□□□□ 0.56
COL16A1Q07092 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC18.55■□□□□ 0.56
COL16A1Q07092 HAX1-211ENST00000532105 771 ntTSL 3 BASIC18.55■□□□□ 0.56
COL16A1Q07092 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.55■□□□□ 0.56
COL16A1Q07092 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC18.55■□□□□ 0.56
COL16A1Q07092 AC010335.3-201ENST00000623767 531 ntBASIC18.55■□□□□ 0.56
COL16A1Q07092 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC18.55■□□□□ 0.56
COL16A1Q07092 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC18.55■□□□□ 0.56
COL16A1Q07092 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC18.55■□□□□ 0.56
COL16A1Q07092 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC18.55■□□□□ 0.56
COL16A1Q07092 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC18.55■□□□□ 0.56
COL16A1Q07092 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
COL16A1Q07092 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL16A1Q07092 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
COL16A1Q07092 AC024075.2-201ENST00000598112 1473 ntBASIC18.54■□□□□ 0.56
COL16A1Q07092 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
COL16A1Q07092 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL16A1Q07092 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL16A1Q07092 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL16A1Q07092 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC18.54■□□□□ 0.56
COL16A1Q07092 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC18.54■□□□□ 0.56
COL16A1Q07092 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.54■□□□□ 0.56
COL16A1Q07092 AC008267.3-201ENST00000448776 712 ntBASIC18.54■□□□□ 0.56
COL16A1Q07092 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL16A1Q07092 RN7SL789P-201ENST00000478944 293 ntBASIC18.54■□□□□ 0.56
COL16A1Q07092 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL16A1Q07092 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC18.54■□□□□ 0.56
COL16A1Q07092 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC18.54■□□□□ 0.56
COL16A1Q07092 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL16A1Q07092 KRT18P8-201ENST00000581937 1246 ntBASIC18.54■□□□□ 0.56
COL16A1Q07092 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
COL16A1Q07092 PDLIM1P1-201ENST00000604187 969 ntBASIC18.54■□□□□ 0.56
COL16A1Q07092 AC092535.4-201ENST00000609548 397 ntBASIC18.54■□□□□ 0.56
COL16A1Q07092 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.54■□□□□ 0.56
COL16A1Q07092 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL16A1Q07092 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.54■□□□□ 0.56
COL16A1Q07092 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL16A1Q07092 AL590824.1-201ENST00000403828 1349 ntBASIC18.54■□□□□ 0.56
COL16A1Q07092 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL16A1Q07092 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL16A1Q07092 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms