Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CX3CL1P78423 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CX3CL1P78423 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 AC139712.1-201ENST00000378256 1875 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
CX3CL1P78423 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.71□□□□□ -0.53
CX3CL1P78423 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CX3CL1P78423 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.71□□□□□ -0.53
CX3CL1P78423 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.71□□□□□ -0.53
CX3CL1P78423 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CX3CL1P78423 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 AC005562.1-201ENST00000583030 3219 ntBASIC11.71□□□□□ -0.53
CX3CL1P78423 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 STX1A-203ENST00000395155 783 ntTSL 2 BASIC11.71□□□□□ -0.53
CX3CL1P78423 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC11.71□□□□□ -0.53
CX3CL1P78423 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.71□□□□□ -0.53
CX3CL1P78423 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.71□□□□□ -0.53
CX3CL1P78423 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.71□□□□□ -0.53
CX3CL1P78423 HLA-V-201ENST00000429037 534 ntBASIC11.71□□□□□ -0.53
CX3CL1P78423 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.71□□□□□ -0.53
CX3CL1P78423 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.71□□□□□ -0.53
CX3CL1P78423 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.71□□□□□ -0.53
CX3CL1P78423 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.71□□□□□ -0.53
CX3CL1P78423 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.71□□□□□ -0.53
CX3CL1P78423 IGHV3-71-201ENST00000523324 359 ntBASIC11.71□□□□□ -0.53
CX3CL1P78423 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.71□□□□□ -0.53
CX3CL1P78423 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CX3CL1P78423 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.71□□□□□ -0.53
CX3CL1P78423 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.71□□□□□ -0.53
CX3CL1P78423 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.71□□□□□ -0.53
CX3CL1P78423 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.71□□□□□ -0.53
CX3CL1P78423 AC008825.2-201ENST00000603374 718 ntBASIC11.71□□□□□ -0.53
CX3CL1P78423 AL358472.3-201ENST00000608147 415 ntBASIC11.71□□□□□ -0.53
CX3CL1P78423 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CX3CL1P78423 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.71□□□□□ -0.53
CX3CL1P78423 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.71□□□□□ -0.53
CX3CL1P78423 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.71□□□□□ -0.53
CX3CL1P78423 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CX3CL1P78423 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CX3CL1P78423 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CX3CL1P78423 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.71□□□□□ -0.54
CX3CL1P78423 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CX3CL1P78423 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CX3CL1P78423 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CX3CL1P78423 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CX3CL1P78423 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.71□□□□□ -0.54
CX3CL1P78423 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CX3CL1P78423 MIR193BHG-211ENST00000641433 5365 ntBASIC11.71□□□□□ -0.54
CX3CL1P78423 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
CX3CL1P78423 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CX3CL1P78423 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
CX3CL1P78423 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CX3CL1P78423 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.7□□□□□ -0.54
CX3CL1P78423 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.7□□□□□ -0.54
CX3CL1P78423 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CX3CL1P78423 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
CX3CL1P78423 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CX3CL1P78423 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.7□□□□□ -0.54
CX3CL1P78423 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CX3CL1P78423 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CX3CL1P78423 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms