Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 BAATP1-201ENST00000412284 1225 ntBASIC12.59□□□□□ -0.39
UBA52P62987 GHSR-202ENST00000427970 912 ntBASIC12.59□□□□□ -0.39
UBA52P62987 VDAC1P7-201ENST00000462417 847 ntBASIC12.59□□□□□ -0.39
UBA52P62987 AC099548.2-209ENST00000480264 625 ntBASIC12.59□□□□□ -0.39
UBA52P62987 FTH1P14-201ENST00000482930 551 ntBASIC12.59□□□□□ -0.39
UBA52P62987 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.59□□□□□ -0.39
UBA52P62987 AC108725.1-201ENST00000495472 409 ntBASIC12.59□□□□□ -0.39
UBA52P62987 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.59□□□□□ -0.39
UBA52P62987 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.59□□□□□ -0.39
UBA52P62987 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.59□□□□□ -0.39
UBA52P62987 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 AC010328.2-201ENST00000597698 1111 ntBASIC12.59□□□□□ -0.39
UBA52P62987 AC068587.10-201ENST00000641210 219 ntBASIC12.59□□□□□ -0.39
UBA52P62987 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.59□□□□□ -0.39
UBA52P62987 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.59□□□□□ -0.39
UBA52P62987 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.59□□□□□ -0.39
UBA52P62987 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
UBA52P62987 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.59□□□□□ -0.39
UBA52P62987 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.39
UBA52P62987 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.58□□□□□ -0.39
UBA52P62987 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
UBA52P62987 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.58□□□□□ -0.39
UBA52P62987 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.58□□□□□ -0.4
UBA52P62987 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.58□□□□□ -0.4
UBA52P62987 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
UBA52P62987 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.58□□□□□ -0.4
UBA52P62987 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.58□□□□□ -0.4
UBA52P62987 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.58□□□□□ -0.4
UBA52P62987 AC016694.1-201ENST00000434179 700 ntBASIC12.58□□□□□ -0.4
UBA52P62987 AC012441.1-201ENST00000446669 685 ntBASIC12.58□□□□□ -0.4
UBA52P62987 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.58□□□□□ -0.4
UBA52P62987 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 AP001063.1-201ENST00000568332 529 ntBASIC12.58□□□□□ -0.4
UBA52P62987 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.58□□□□□ -0.4
UBA52P62987 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.58□□□□□ -0.4
UBA52P62987 CLUHP6-201ENST00000580789 941 ntBASIC12.58□□□□□ -0.4
UBA52P62987 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.58□□□□□ -0.4
UBA52P62987 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.58□□□□□ -0.4
UBA52P62987 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.58□□□□□ -0.4
UBA52P62987 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
UBA52P62987 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.58□□□□□ -0.4
UBA52P62987 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
UBA52P62987 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
UBA52P62987 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
UBA52P62987 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 AC134312.5-201ENST00000568031 1313 ntBASIC12.58□□□□□ -0.4
UBA52P62987 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
UBA52P62987 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 AC004899.2-201ENST00000622993 3860 ntBASIC12.58□□□□□ -0.4
UBA52P62987 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBA52P62987 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
UBA52P62987 PCDHA5-203ENST00000614258 4248 ntBASIC12.58□□□□□ -0.4
UBA52P62987 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.57□□□□□ -0.4
UBA52P62987 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 TCAM1P-207ENST00000485295 1537 ntBASIC12.57□□□□□ -0.4
UBA52P62987 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms