Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
VSX2P58304 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VSX2P58304 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.87□□□□□ -0.19
VSX2P58304 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 AC011498.7-201ENST00000624986 2027 ntBASIC13.86□□□□□ -0.19
VSX2P58304 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.86□□□□□ -0.19
VSX2P58304 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 AL157791.1-201ENST00000553667 1699 ntBASIC13.86□□□□□ -0.19
VSX2P58304 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.86□□□□□ -0.19
VSX2P58304 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
VSX2P58304 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VSX2P58304 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VSX2P58304 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.86□□□□□ -0.19
VSX2P58304 KRT18P36-201ENST00000411618 1276 ntBASIC13.86□□□□□ -0.19
VSX2P58304 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.86□□□□□ -0.19
VSX2P58304 AL008707.1-201ENST00000422498 534 ntBASIC13.86□□□□□ -0.19
VSX2P58304 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.86□□□□□ -0.19
VSX2P58304 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.86□□□□□ -0.19
VSX2P58304 RN7SL11P-201ENST00000471305 293 ntBASIC13.86□□□□□ -0.19
VSX2P58304 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.86□□□□□ -0.19
VSX2P58304 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.86□□□□□ -0.19
VSX2P58304 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.86□□□□□ -0.19
VSX2P58304 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.86□□□□□ -0.19
VSX2P58304 AC124068.2-201ENST00000569473 1109 ntBASIC13.86□□□□□ -0.19
VSX2P58304 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.86□□□□□ -0.19
VSX2P58304 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 MIR6074-201ENST00000612054 107 ntBASIC13.86□□□□□ -0.19
VSX2P58304 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VSX2P58304 AC100757.4-201ENST00000626934 759 ntBASIC13.86□□□□□ -0.19
VSX2P58304 NAP1L6-202ENST00000641404 1222 ntBASIC13.86□□□□□ -0.19
VSX2P58304 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.86□□□□□ -0.19
VSX2P58304 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
VSX2P58304 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.86□□□□□ -0.19
VSX2P58304 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VSX2P58304 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VSX2P58304 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
VSX2P58304 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 AC138969.2-201ENST00000532739 9932 ntBASIC13.85□□□□□ -0.19
VSX2P58304 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.85□□□□□ -0.19
VSX2P58304 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
VSX2P58304 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.85□□□□□ -0.19
VSX2P58304 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VSX2P58304 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
VSX2P58304 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.85□□□□□ -0.19
VSX2P58304 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.85□□□□□ -0.19
VSX2P58304 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.85□□□□□ -0.19
VSX2P58304 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.85□□□□□ -0.19
VSX2P58304 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.85□□□□□ -0.19
VSX2P58304 RN7SL774P-201ENST00000577467 290 ntBASIC13.85□□□□□ -0.19
VSX2P58304 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.85□□□□□ -0.19
VSX2P58304 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.85□□□□□ -0.19
VSX2P58304 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms