Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.51□□□□□ -0.25
PSMD4P55036 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PSMD4P55036 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.51□□□□□ -0.25
PSMD4P55036 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.51□□□□□ -0.25
PSMD4P55036 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 BTBD6P1-201ENST00000412176 1267 ntBASIC13.51□□□□□ -0.25
PSMD4P55036 AL354877.1-201ENST00000424412 413 ntBASIC13.51□□□□□ -0.25
PSMD4P55036 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.51□□□□□ -0.25
PSMD4P55036 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PSMD4P55036 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.51□□□□□ -0.25
PSMD4P55036 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.51□□□□□ -0.25
PSMD4P55036 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.51□□□□□ -0.25
PSMD4P55036 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.51□□□□□ -0.25
PSMD4P55036 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
PSMD4P55036 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.51□□□□□ -0.25
PSMD4P55036 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.51□□□□□ -0.25
PSMD4P55036 MIR6720-201ENST00000611664 98 ntBASIC13.51□□□□□ -0.25
PSMD4P55036 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.51□□□□□ -0.25
PSMD4P55036 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.51□□□□□ -0.25
PSMD4P55036 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.51□□□□□ -0.25
PSMD4P55036 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
PSMD4P55036 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PSMD4P55036 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PSMD4P55036 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.5□□□□□ -0.25
PSMD4P55036 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.5□□□□□ -0.25
PSMD4P55036 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 AC064801.2-201ENST00000625052 1303 ntBASIC13.5□□□□□ -0.25
PSMD4P55036 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
PSMD4P55036 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.5□□□□□ -0.25
PSMD4P55036 TUBB8P8-201ENST00000458717 1058 ntBASIC13.5□□□□□ -0.25
PSMD4P55036 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.5□□□□□ -0.25
PSMD4P55036 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
PSMD4P55036 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.5□□□□□ -0.25
PSMD4P55036 RBM8B-201ENST00000555532 525 ntBASIC13.5□□□□□ -0.25
PSMD4P55036 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.5□□□□□ -0.25
PSMD4P55036 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.5□□□□□ -0.25
PSMD4P55036 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.5□□□□□ -0.25
PSMD4P55036 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.5□□□□□ -0.25
PSMD4P55036 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.5□□□□□ -0.25
PSMD4P55036 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.5□□□□□ -0.25
PSMD4P55036 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.5□□□□□ -0.25
PSMD4P55036 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PSMD4P55036 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
PSMD4P55036 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PSMD4P55036 AL359881.3-201ENST00000602640 1721 ntBASIC13.5□□□□□ -0.25
PSMD4P55036 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
PSMD4P55036 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PSMD4P55036 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PSMD4P55036 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.49□□□□□ -0.25
PSMD4P55036 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PSMD4P55036 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PSMD4P55036 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.49□□□□□ -0.25
PSMD4P55036 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.49□□□□□ -0.25
PSMD4P55036 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PSMD4P55036 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.49□□□□□ -0.25
PSMD4P55036 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PSMD4P55036 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PSMD4P55036 E2F3P2-201ENST00000447755 1422 ntBASIC13.49□□□□□ -0.25
PSMD4P55036 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms