Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CACNA2D1P54289 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CACNA2D1P54289 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CACNA2D1P54289 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CACNA2D1P54289 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CACNA2D1P54289 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CACNA2D1P54289 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CACNA2D1P54289 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CACNA2D1P54289 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CACNA2D1P54289 LINC01165-201ENST00000445190 1623 ntBASIC15.32■□□□□ 0.04
CACNA2D1P54289 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CACNA2D1P54289 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.32■□□□□ 0.04
CACNA2D1P54289 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 AL008707.1-201ENST00000422498 534 ntBASIC15.31■□□□□ 0.04
CACNA2D1P54289 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 AC073150.1-201ENST00000450406 1084 ntBASIC15.31■□□□□ 0.04
CACNA2D1P54289 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 NUP210P1-202ENST00000504322 710 ntBASIC15.31■□□□□ 0.04
CACNA2D1P54289 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 AC124068.2-201ENST00000569473 1109 ntBASIC15.31■□□□□ 0.04
CACNA2D1P54289 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 NAP1L6-202ENST00000641404 1222 ntBASIC15.31■□□□□ 0.04
CACNA2D1P54289 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 COL6A4P2-202ENST00000504443 2753 ntBASIC15.31■□□□□ 0.04
CACNA2D1P54289 CICP8-201ENST00000455800 2813 ntBASIC15.31■□□□□ 0.04
CACNA2D1P54289 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CACNA2D1P54289 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.31■□□□□ 0.04
CACNA2D1P54289 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNA2D1P54289 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNA2D1P54289 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNA2D1P54289 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CACNA2D1P54289 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNA2D1P54289 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CACNA2D1P54289 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNA2D1P54289 PDIA3P2-201ENST00000428073 158 ntBASIC15.3■□□□□ 0.04
CACNA2D1P54289 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 AL161932.2-201ENST00000435436 679 ntBASIC15.3■□□□□ 0.04
CACNA2D1P54289 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 Z97180.1-201ENST00000445173 988 ntBASIC15.3■□□□□ 0.04
CACNA2D1P54289 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 IMP3P2-201ENST00000489760 475 ntBASIC15.3■□□□□ 0.04
CACNA2D1P54289 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 AC105129.2-201ENST00000559536 390 ntBASIC15.3■□□□□ 0.04
CACNA2D1P54289 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CACNA2D1P54289 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNA2D1P54289 RN7SL832P-201ENST00000607781 1756 ntBASIC15.3■□□□□ 0.04
CACNA2D1P54289 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms