Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 HSPB1P2-201ENST00000448722 546 ntBASIC12.89□□□□□ -0.35
CSNK1A1P48729 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.89□□□□□ -0.35
CSNK1A1P48729 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 AC021723.1-201ENST00000486306 515 ntBASIC12.89□□□□□ -0.35
CSNK1A1P48729 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 MIR4783-201ENST00000580343 82 ntBASIC12.89□□□□□ -0.35
CSNK1A1P48729 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 AC104506.1-201ENST00000609247 429 ntBASIC12.89□□□□□ -0.35
CSNK1A1P48729 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CSNK1A1P48729 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSNK1A1P48729 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 KLF2P1-201ENST00000447438 1042 ntBASIC12.88□□□□□ -0.35
CSNK1A1P48729 RPL13AP20-201ENST00000459725 609 ntBASIC12.88□□□□□ -0.35
CSNK1A1P48729 RPSAP36-202ENST00000494591 1261 ntBASIC12.88□□□□□ -0.35
CSNK1A1P48729 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 AC005962.1-201ENST00000584100 773 ntBASIC12.88□□□□□ -0.35
CSNK1A1P48729 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 Z98259.2-201ENST00000641583 609 ntBASIC12.88□□□□□ -0.35
CSNK1A1P48729 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSNK1A1P48729 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
CSNK1A1P48729 TUBB8P4-201ENST00000511806 1324 ntBASIC12.88□□□□□ -0.35
CSNK1A1P48729 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CSNK1A1P48729 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSNK1A1P48729 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms