Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.9□□□□□ -0.34
CDKN2AP42771 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CDKN2AP42771 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CDKN2AP42771 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
CDKN2AP42771 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CDKN2AP42771 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.9□□□□□ -0.34
CDKN2AP42771 REXO1L6P-201ENST00000603433 1515 ntBASIC12.9□□□□□ -0.34
CDKN2AP42771 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.9□□□□□ -0.34
CDKN2AP42771 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.9□□□□□ -0.34
CDKN2AP42771 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.9□□□□□ -0.34
CDKN2AP42771 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.9□□□□□ -0.34
CDKN2AP42771 COX5BP8-201ENST00000416911 349 ntBASIC12.9□□□□□ -0.34
CDKN2AP42771 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.9□□□□□ -0.34
CDKN2AP42771 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.9□□□□□ -0.34
CDKN2AP42771 KRT43P-201ENST00000434019 910 ntBASIC12.9□□□□□ -0.34
CDKN2AP42771 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.9□□□□□ -0.34
CDKN2AP42771 AL157407.1-201ENST00000435784 904 ntBASIC12.9□□□□□ -0.34
CDKN2AP42771 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.9□□□□□ -0.34
CDKN2AP42771 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CDKN2AP42771 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.9□□□□□ -0.34
CDKN2AP42771 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CDKN2AP42771 AP000812.2-201ENST00000538934 718 ntBASIC12.9□□□□□ -0.34
CDKN2AP42771 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.9□□□□□ -0.34
CDKN2AP42771 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.9□□□□□ -0.34
CDKN2AP42771 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.9□□□□□ -0.34
CDKN2AP42771 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.9□□□□□ -0.34
CDKN2AP42771 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.9□□□□□ -0.34
CDKN2AP42771 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.9□□□□□ -0.34
CDKN2AP42771 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CDKN2AP42771 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.9□□□□□ -0.34
CDKN2AP42771 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.9□□□□□ -0.34
CDKN2AP42771 AC107918.4-201ENST00000641966 3141 ntBASIC12.9□□□□□ -0.34
CDKN2AP42771 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDKN2AP42771 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
CDKN2AP42771 AL137784.3-201ENST00000623858 2288 ntBASIC12.9□□□□□ -0.35
CDKN2AP42771 PPT1-213ENST00000641319 2388 ntBASIC12.89□□□□□ -0.35
CDKN2AP42771 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.89□□□□□ -0.35
CDKN2AP42771 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
CDKN2AP42771 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 AC126335.2-201ENST00000623362 4637 ntBASIC12.89□□□□□ -0.35
CDKN2AP42771 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 AL365181.3-201ENST00000605886 3222 ntBASIC12.89□□□□□ -0.35
CDKN2AP42771 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CDKN2AP42771 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.89□□□□□ -0.35
CDKN2AP42771 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.89□□□□□ -0.35
CDKN2AP42771 NME2P1-201ENST00000426182 414 ntBASIC12.89□□□□□ -0.35
CDKN2AP42771 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.89□□□□□ -0.35
CDKN2AP42771 ST13P19-201ENST00000442505 1124 ntBASIC12.89□□□□□ -0.35
CDKN2AP42771 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.89□□□□□ -0.35
CDKN2AP42771 HOMER2P2-201ENST00000451621 847 ntBASIC12.89□□□□□ -0.35
CDKN2AP42771 CROCCP4-201ENST00000457096 498 ntBASIC12.89□□□□□ -0.35
CDKN2AP42771 AC100850.1-201ENST00000506768 649 ntBASIC12.89□□□□□ -0.35
CDKN2AP42771 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDKN2AP42771 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.89□□□□□ -0.35
CDKN2AP42771 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.89□□□□□ -0.35
CDKN2AP42771 AP006547.1-201ENST00000563435 692 ntBASIC12.89□□□□□ -0.35
CDKN2AP42771 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.89□□□□□ -0.35
CDKN2AP42771 MIR6720-201ENST00000611664 98 ntBASIC12.89□□□□□ -0.35
CDKN2AP42771 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.89□□□□□ -0.35
CDKN2AP42771 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms