Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.33□□□□□ -0.12
HMGCLP35914 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HMGCLP35914 SHMT1P1-201ENST00000419974 1312 ntBASIC14.33□□□□□ -0.12
HMGCLP35914 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCLP35914 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCLP35914 AC067750.1-201ENST00000608826 6545 ntBASIC14.33□□□□□ -0.12
HMGCLP35914 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCLP35914 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCLP35914 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCLP35914 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCLP35914 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGCLP35914 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.32□□□□□ -0.12
HMGCLP35914 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.32□□□□□ -0.12
HMGCLP35914 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HMGCLP35914 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HMGCLP35914 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.32□□□□□ -0.12
HMGCLP35914 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.32□□□□□ -0.12
HMGCLP35914 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.32□□□□□ -0.12
HMGCLP35914 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 LINC01165-201ENST00000445190 1623 ntBASIC14.32□□□□□ -0.12
HMGCLP35914 AL157996.1-201ENST00000624684 2299 ntBASIC14.32□□□□□ -0.12
HMGCLP35914 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 AL157791.1-201ENST00000553667 1699 ntBASIC14.32□□□□□ -0.12
HMGCLP35914 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HMGCLP35914 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HMGCLP35914 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGCLP35914 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGCLP35914 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGCLP35914 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGCLP35914 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HMGCLP35914 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.31□□□□□ -0.12
HMGCLP35914 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMGCLP35914 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
HMGCLP35914 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HMGCLP35914 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGCLP35914 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.31□□□□□ -0.12
HMGCLP35914 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.31□□□□□ -0.12
HMGCLP35914 FNTAP2-201ENST00000430308 634 ntBASIC14.31□□□□□ -0.12
HMGCLP35914 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms