Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.55■□□□□ 0.4
PDE6BP35913 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6BP35913 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.55■□□□□ 0.4
PDE6BP35913 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.55■□□□□ 0.4
PDE6BP35913 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.55■□□□□ 0.4
PDE6BP35913 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 AC215219.1-201ENST00000400706 1817 ntBASIC17.55■□□□□ 0.4
PDE6BP35913 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6BP35913 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6BP35913 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PDE6BP35913 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDE6BP35913 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 AC138761.6-201ENST00000583997 1423 ntBASIC17.55■□□□□ 0.4
PDE6BP35913 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDE6BP35913 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDE6BP35913 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6BP35913 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
PDE6BP35913 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDE6BP35913 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6BP35913 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDE6BP35913 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6BP35913 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6BP35913 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
PDE6BP35913 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PDE6BP35913 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 GEMIN8P4-201ENST00000380526 729 ntBASIC17.54■□□□□ 0.4
PDE6BP35913 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 AC073210.1-201ENST00000414799 232 ntBASIC17.54■□□□□ 0.4
PDE6BP35913 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.54■□□□□ 0.4
PDE6BP35913 SERBP1P2-201ENST00000436888 1164 ntBASIC17.54■□□□□ 0.4
PDE6BP35913 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.54■□□□□ 0.4
PDE6BP35913 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.54■□□□□ 0.4
PDE6BP35913 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.54■□□□□ 0.4
PDE6BP35913 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 HNRNPA1P5-201ENST00000558213 966 ntBASIC17.54■□□□□ 0.4
PDE6BP35913 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
PDE6BP35913 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.54■□□□□ 0.4
PDE6BP35913 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.54■□□□□ 0.4
PDE6BP35913 AC132825.4-202ENST00000578792 434 ntBASIC17.54■□□□□ 0.4
PDE6BP35913 TYMSP2-201ENST00000589501 424 ntBASIC17.54■□□□□ 0.4
PDE6BP35913 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.54■□□□□ 0.4
PDE6BP35913 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6BP35913 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6BP35913 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6BP35913 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDE6BP35913 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.54■□□□□ 0.4
PDE6BP35913 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDE6BP35913 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.54■□□□□ 0.4
PDE6BP35913 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDE6BP35913 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
PDE6BP35913 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6BP35913 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PDE6BP35913 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PDE6BP35913 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 TBC1D27-202ENST00000424239 1573 ntBASIC17.53■□□□□ 0.4
PDE6BP35913 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 KRT8P43-201ENST00000406052 1458 ntBASIC17.53■□□□□ 0.4
PDE6BP35913 AC007952.5-201ENST00000572818 1486 ntBASIC17.53■□□□□ 0.4
PDE6BP35913 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6BP35913 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6BP35913 RN7SL128P-201ENST00000467883 305 ntBASIC17.53■□□□□ 0.4
PDE6BP35913 AL512310.5-201ENST00000551999 515 ntBASIC17.53■□□□□ 0.4
PDE6BP35913 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6BP35913 RN7SL556P-201ENST00000582856 298 ntBASIC17.53■□□□□ 0.4
PDE6BP35913 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms