Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB3BP20337 AC069120.2-201ENST00000524091 540 ntBASIC12.72□□□□□ -0.37
RAB3BP20337 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.72□□□□□ -0.37
RAB3BP20337 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.72□□□□□ -0.37
RAB3BP20337 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.72□□□□□ -0.37
RAB3BP20337 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.72□□□□□ -0.37
RAB3BP20337 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.72□□□□□ -0.37
RAB3BP20337 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.72□□□□□ -0.37
RAB3BP20337 SPDYE22P-201ENST00000582158 798 ntBASIC12.72□□□□□ -0.37
RAB3BP20337 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.72□□□□□ -0.37
RAB3BP20337 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RAB3BP20337 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
RAB3BP20337 AL928654.5-201ENST00000624831 2501 ntBASIC12.72□□□□□ -0.37
RAB3BP20337 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB3BP20337 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB3BP20337 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 AC024075.2-201ENST00000598112 1473 ntBASIC12.72□□□□□ -0.37
RAB3BP20337 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
RAB3BP20337 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RAB3BP20337 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB3BP20337 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB3BP20337 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB3BP20337 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
RAB3BP20337 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB3BP20337 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 DLX4-206ENST00000611342 1662 ntBASIC12.71□□□□□ -0.37
RAB3BP20337 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB3BP20337 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB3BP20337 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB3BP20337 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RAB3BP20337 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB3BP20337 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB3BP20337 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.71□□□□□ -0.37
RAB3BP20337 KLF2P2-201ENST00000416807 1039 ntBASIC12.71□□□□□ -0.37
RAB3BP20337 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB3BP20337 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB3BP20337 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.71□□□□□ -0.37
RAB3BP20337 RARRES2P5-201ENST00000564013 466 ntBASIC12.71□□□□□ -0.37
RAB3BP20337 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.71□□□□□ -0.37
RAB3BP20337 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB3BP20337 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
RAB3BP20337 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB3BP20337 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RAB3BP20337 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB3BP20337 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB3BP20337 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB3BP20337 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RAB3BP20337 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.71□□□□□ -0.38
RAB3BP20337 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.71□□□□□ -0.38
RAB3BP20337 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB3BP20337 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB3BP20337 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB3BP20337 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RAB3BP20337 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.71□□□□□ -0.38
RAB3BP20337 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.71□□□□□ -0.38
RAB3BP20337 BTBD7P1-201ENST00000447253 1453 ntBASIC12.71□□□□□ -0.38
RAB3BP20337 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
RAB3BP20337 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB3BP20337 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RAB3BP20337 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
RAB3BP20337 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB3BP20337 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
RAB3BP20337 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RAB3BP20337 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 POM121L14P-201ENST00000406100 1558 ntBASIC12.7□□□□□ -0.38
RAB3BP20337 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 AL590440.2-201ENST00000641973 1595 ntBASIC12.7□□□□□ -0.38
RAB3BP20337 AP000437.1-201ENST00000624057 2085 ntBASIC12.7□□□□□ -0.38
RAB3BP20337 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB3BP20337 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB3BP20337 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms