Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 AC072061.1-201ENST00000569710 2234 ntBASIC12.83□□□□□ -0.36
CTLA4P16410 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.83□□□□□ -0.36
CTLA4P16410 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.83□□□□□ -0.36
CTLA4P16410 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.83□□□□□ -0.36
CTLA4P16410 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.83□□□□□ -0.36
CTLA4P16410 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CTLA4P16410 RBM8B-201ENST00000555532 525 ntBASIC12.83□□□□□ -0.36
CTLA4P16410 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CTLA4P16410 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.83□□□□□ -0.36
CTLA4P16410 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CTLA4P16410 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CTLA4P16410 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.83□□□□□ -0.36
CTLA4P16410 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.83□□□□□ -0.36
CTLA4P16410 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
CTLA4P16410 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CTLA4P16410 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CTLA4P16410 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CTLA4P16410 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CTLA4P16410 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CTLA4P16410 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.82□□□□□ -0.36
CTLA4P16410 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.82□□□□□ -0.36
CTLA4P16410 KLF2P1-201ENST00000447438 1042 ntBASIC12.82□□□□□ -0.36
CTLA4P16410 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.82□□□□□ -0.36
CTLA4P16410 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 GAPDHP21-201ENST00000450301 1010 ntBASIC12.82□□□□□ -0.36
CTLA4P16410 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.82□□□□□ -0.36
CTLA4P16410 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.82□□□□□ -0.36
CTLA4P16410 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
CTLA4P16410 RAB43P1-201ENST00000561790 589 ntBASIC12.82□□□□□ -0.36
CTLA4P16410 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.82□□□□□ -0.36
CTLA4P16410 BAP1-211ENST00000615113 489 ntBASIC12.82□□□□□ -0.36
CTLA4P16410 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CTLA4P16410 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.82□□□□□ -0.36
CTLA4P16410 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CTLA4P16410 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CTLA4P16410 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.82□□□□□ -0.36
CTLA4P16410 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CTLA4P16410 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.82□□□□□ -0.36
CTLA4P16410 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.81□□□□□ -0.36
CTLA4P16410 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CTLA4P16410 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
CTLA4P16410 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CTLA4P16410 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.81□□□□□ -0.36
CTLA4P16410 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CTLA4P16410 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 AL928654.5-201ENST00000624831 2501 ntBASIC12.81□□□□□ -0.36
CTLA4P16410 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 LAP3P2-201ENST00000454686 1454 ntBASIC12.81□□□□□ -0.36
CTLA4P16410 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.81□□□□□ -0.36
CTLA4P16410 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms