Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NCK1P16333 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 CLUHP2-201ENST00000426660 1303 ntBASIC13.7□□□□□ -0.22
NCK1P16333 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.7□□□□□ -0.22
NCK1P16333 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NCK1P16333 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.7□□□□□ -0.22
NCK1P16333 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NCK1P16333 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.7□□□□□ -0.22
NCK1P16333 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.7□□□□□ -0.22
NCK1P16333 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.7□□□□□ -0.22
NCK1P16333 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
NCK1P16333 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.7□□□□□ -0.22
NCK1P16333 AC104596.2-201ENST00000512793 793 ntBASIC13.7□□□□□ -0.22
NCK1P16333 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.7□□□□□ -0.22
NCK1P16333 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.7□□□□□ -0.22
NCK1P16333 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NCK1P16333 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.7□□□□□ -0.22
NCK1P16333 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.7□□□□□ -0.22
NCK1P16333 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
NCK1P16333 BAP1-211ENST00000615113 489 ntBASIC13.7□□□□□ -0.22
NCK1P16333 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NCK1P16333 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
NCK1P16333 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NCK1P16333 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NCK1P16333 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NCK1P16333 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
NCK1P16333 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
NCK1P16333 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NCK1P16333 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.69□□□□□ -0.22
NCK1P16333 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.69□□□□□ -0.22
NCK1P16333 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.69□□□□□ -0.22
NCK1P16333 RRP7BP-205ENST00000566851 833 ntBASIC13.69□□□□□ -0.22
NCK1P16333 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.69□□□□□ -0.22
NCK1P16333 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.69□□□□□ -0.22
NCK1P16333 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.69□□□□□ -0.22
NCK1P16333 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.69□□□□□ -0.22
NCK1P16333 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.69□□□□□ -0.22
NCK1P16333 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
NCK1P16333 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
NCK1P16333 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NCK1P16333 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.69□□□□□ -0.22
NCK1P16333 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NCK1P16333 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.69□□□□□ -0.22
NCK1P16333 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NCK1P16333 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.68□□□□□ -0.22
NCK1P16333 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms