Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
DEFA4P12838 AL033527.5-201ENST00000641382 801 ntBASIC11.85□□□□□ -0.51
DEFA4P12838 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.85□□□□□ -0.51
DEFA4P12838 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 AC111170.3-201ENST00000624282 2464 ntBASIC11.85□□□□□ -0.51
DEFA4P12838 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
DEFA4P12838 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
DEFA4P12838 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
DEFA4P12838 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 AGGF1P1-201ENST00000509500 2073 ntBASIC11.84□□□□□ -0.51
DEFA4P12838 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 ELK1P1-201ENST00000485699 580 ntBASIC11.84□□□□□ -0.51
DEFA4P12838 API5-211ENST00000534695 560 ntTSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
DEFA4P12838 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.84□□□□□ -0.51
DEFA4P12838 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.84□□□□□ -0.51
DEFA4P12838 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
DEFA4P12838 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.84□□□□□ -0.51
DEFA4P12838 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
DEFA4P12838 AC090505.1-201ENST00000430515 1834 ntBASIC11.83□□□□□ -0.51
DEFA4P12838 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
DEFA4P12838 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.83□□□□□ -0.51
DEFA4P12838 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
DEFA4P12838 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
DEFA4P12838 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
DEFA4P12838 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
DEFA4P12838 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
DEFA4P12838 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
DEFA4P12838 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
DEFA4P12838 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
DEFA4P12838 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.83□□□□□ -0.52
DEFA4P12838 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
DEFA4P12838 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
DEFA4P12838 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
DEFA4P12838 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
DEFA4P12838 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
DEFA4P12838 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
DEFA4P12838 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
DEFA4P12838 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.83□□□□□ -0.52
DEFA4P12838 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms