Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CAPN1P07384 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 BTBD6P1-201ENST00000412176 1267 ntBASIC14.31□□□□□ -0.12
CAPN1P07384 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.31□□□□□ -0.12
CAPN1P07384 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.31□□□□□ -0.12
CAPN1P07384 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CAPN1P07384 EEF1DP1-201ENST00000585891 896 ntBASIC14.31□□□□□ -0.12
CAPN1P07384 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.31□□□□□ -0.12
CAPN1P07384 AC243960.2-201ENST00000600996 747 ntBASIC14.31□□□□□ -0.12
CAPN1P07384 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 AC138466.3-201ENST00000619983 221 ntBASIC14.31□□□□□ -0.12
CAPN1P07384 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CAPN1P07384 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CAPN1P07384 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN1P07384 AC015818.8-201ENST00000587907 1519 ntBASIC14.31□□□□□ -0.12
CAPN1P07384 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CAPN1P07384 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN1P07384 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
CAPN1P07384 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CAPN1P07384 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 AC139712.1-201ENST00000378256 1875 ntBASIC14.3□□□□□ -0.12
CAPN1P07384 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN1P07384 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.3□□□□□ -0.12
CAPN1P07384 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.3□□□□□ -0.12
CAPN1P07384 AP003171.2-201ENST00000528208 925 ntBASIC14.3□□□□□ -0.12
CAPN1P07384 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CAPN1P07384 AC103988.2-201ENST00000561804 725 ntBASIC14.3□□□□□ -0.12
CAPN1P07384 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.3□□□□□ -0.12
CAPN1P07384 AC103810.3-201ENST00000583567 96 ntBASIC14.3□□□□□ -0.12
CAPN1P07384 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CAPN1P07384 AL606495.2-201ENST00000605867 535 ntBASIC14.3□□□□□ -0.12
CAPN1P07384 AC005695.3-201ENST00000614522 232 ntBASIC14.3□□□□□ -0.12
CAPN1P07384 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.3□□□□□ -0.12
CAPN1P07384 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.3□□□□□ -0.12
CAPN1P07384 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN1P07384 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 FKBP4P6-201ENST00000457486 1332 ntBASIC14.3□□□□□ -0.12
CAPN1P07384 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.3□□□□□ -0.12
CAPN1P07384 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
CAPN1P07384 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.3□□□□□ -0.12
CAPN1P07384 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN1P07384 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN1P07384 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CAPN1P07384 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN1P07384 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN1P07384 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CAPN1P07384 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CAPN1P07384 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms