Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.7□□□□□ -0.22
MT-ND1P03886 AL442647.2-201ENST00000429864 857 ntBASIC13.7□□□□□ -0.22
MT-ND1P03886 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.7□□□□□ -0.22
MT-ND1P03886 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.7□□□□□ -0.22
MT-ND1P03886 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.7□□□□□ -0.22
MT-ND1P03886 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 RNA5SP421-201ENST00000516864 134 ntBASIC13.7□□□□□ -0.22
MT-ND1P03886 AP001582.1-201ENST00000525856 295 ntBASIC13.7□□□□□ -0.22
MT-ND1P03886 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.7□□□□□ -0.22
MT-ND1P03886 RFPL4AP1-201ENST00000530883 850 ntBASIC13.7□□□□□ -0.22
MT-ND1P03886 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 AC006538.3-201ENST00000612495 578 ntBASIC13.7□□□□□ -0.22
MT-ND1P03886 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 AL645937.6-201ENST00000641122 3727 ntBASIC13.7□□□□□ -0.22
MT-ND1P03886 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
MT-ND1P03886 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
MT-ND1P03886 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.69□□□□□ -0.22
MT-ND1P03886 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.69□□□□□ -0.22
MT-ND1P03886 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.69□□□□□ -0.22
MT-ND1P03886 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 C1QBPP1-201ENST00000400117 770 ntBASIC13.69□□□□□ -0.22
MT-ND1P03886 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.69□□□□□ -0.22
MT-ND1P03886 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MT-ND1P03886 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.69□□□□□ -0.22
MT-ND1P03886 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.69□□□□□ -0.22
MT-ND1P03886 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.69□□□□□ -0.22
MT-ND1P03886 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.69□□□□□ -0.22
MT-ND1P03886 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.69□□□□□ -0.22
MT-ND1P03886 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
MT-ND1P03886 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.69□□□□□ -0.22
MT-ND1P03886 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.69□□□□□ -0.22
MT-ND1P03886 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.69□□□□□ -0.22
MT-ND1P03886 AC093726.1-201ENST00000608064 963 ntBASIC13.69□□□□□ -0.22
MT-ND1P03886 AC009118.2-201ENST00000613275 655 ntBASIC13.69□□□□□ -0.22
MT-ND1P03886 MIR8072-201ENST00000614241 80 ntBASIC13.69□□□□□ -0.22
MT-ND1P03886 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MT-ND1P03886 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.69□□□□□ -0.22
MT-ND1P03886 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
MT-ND1P03886 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MT-ND1P03886 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 AC135782.3-201ENST00000562782 2105 ntBASIC13.69□□□□□ -0.22
MT-ND1P03886 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MT-ND1P03886 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
MT-ND1P03886 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
MT-ND1P03886 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.68□□□□□ -0.22
MT-ND1P03886 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms