Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TNFP01375 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TNFP01375 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 AC006987.1-201ENST00000413610 527 ntBASIC14.03□□□□□ -0.16
TNFP01375 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFP01375 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 AC079112.1-201ENST00000454972 939 ntBASIC14.03□□□□□ -0.16
TNFP01375 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFP01375 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 AC018635.2-201ENST00000608625 364 ntBASIC14.03□□□□□ -0.16
TNFP01375 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TNFP01375 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.03□□□□□ -0.16
TNFP01375 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFP01375 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TNFP01375 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFP01375 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFP01375 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFP01375 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFP01375 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFP01375 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.02□□□□□ -0.16
TNFP01375 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFP01375 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.02□□□□□ -0.16
TNFP01375 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TNFP01375 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFP01375 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.02□□□□□ -0.16
TNFP01375 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TNFP01375 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TNFP01375 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TNFP01375 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFP01375 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TNFP01375 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TNFP01375 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.02□□□□□ -0.16
TNFP01375 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TNFP01375 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TNFP01375 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TNFP01375 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TNFP01375 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFP01375 NDUFS6P1-201ENST00000485187 316 ntBASIC14.02□□□□□ -0.17
TNFP01375 RPL18AP8-201ENST00000486071 528 ntBASIC14.02□□□□□ -0.17
TNFP01375 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TNFP01375 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.02□□□□□ -0.17
TNFP01375 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFP01375 AC138701.2-201ENST00000553634 226 ntBASIC14.02□□□□□ -0.17
TNFP01375 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFP01375 AC135983.4-201ENST00000564116 1262 ntBASIC14.02□□□□□ -0.17
TNFP01375 MIR5572-201ENST00000583188 137 ntBASIC14.02□□□□□ -0.17
TNFP01375 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFP01375 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFP01375 AC011491.1-203ENST00000637688 543 ntBASIC14.02□□□□□ -0.17
TNFP01375 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.02□□□□□ -0.17
TNFP01375 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFP01375 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TNFP01375 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TNFP01375 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFP01375 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFP01375 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TNFP01375 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TNFP01375 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TNFP01375 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFP01375 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.02□□□□□ -0.17
TNFP01375 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFP01375 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.02□□□□□ -0.17
TNFP01375 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFP01375 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.02□□□□□ -0.17
TNFP01375 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFP01375 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.02□□□□□ -0.17
TNFP01375 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms