Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATP2A1O14983 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATP2A1O14983 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ATP2A1O14983 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP2A1O14983 AL354861.1-201ENST00000445213 355 ntBASIC16.45■□□□□ 0.22
ATP2A1O14983 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP2A1O14983 IGHV3-37-201ENST00000518544 340 ntBASIC16.45■□□□□ 0.22
ATP2A1O14983 ALG1L13P-202ENST00000519320 584 ntBASIC16.45■□□□□ 0.22
ATP2A1O14983 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP2A1O14983 AC138701.2-201ENST00000553634 226 ntBASIC16.45■□□□□ 0.22
ATP2A1O14983 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 NDUFB10P1-201ENST00000567319 521 ntBASIC16.45■□□□□ 0.22
ATP2A1O14983 NUDT4P2-201ENST00000578341 546 ntBASIC16.45■□□□□ 0.22
ATP2A1O14983 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 MIR2392-201ENST00000584881 84 ntBASIC16.45■□□□□ 0.22
ATP2A1O14983 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.45■□□□□ 0.22
ATP2A1O14983 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 CCT8L1P-201ENST00000465400 1674 ntBASIC16.45■□□□□ 0.22
ATP2A1O14983 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ATP2A1O14983 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ATP2A1O14983 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A1O14983 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP2A1O14983 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A1O14983 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ATP2A1O14983 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP2A1O14983 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ATP2A1O14983 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP2A1O14983 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP2A1O14983 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
ATP2A1O14983 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ATP2A1O14983 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP2A1O14983 PPP1R2P4-201ENST00000424051 595 ntBASIC16.44■□□□□ 0.22
ATP2A1O14983 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.44■□□□□ 0.22
ATP2A1O14983 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.44■□□□□ 0.22
ATP2A1O14983 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.44■□□□□ 0.22
ATP2A1O14983 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP2A1O14983 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP2A1O14983 AL133467.4-201ENST00000602953 725 ntBASIC16.44■□□□□ 0.22
ATP2A1O14983 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ATP2A1O14983 AC009145.4-201ENST00000625119 1294 ntBASIC16.44■□□□□ 0.22
ATP2A1O14983 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP2A1O14983 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 FGD5P1-202ENST00000614866 2498 ntBASIC16.44■□□□□ 0.22
ATP2A1O14983 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP2A1O14983 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP2A1O14983 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP2A1O14983 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
ATP2A1O14983 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
ATP2A1O14983 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP2A1O14983 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms