Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 DFFBP1-201ENST00000433250 979 ntBASIC15.04■□□□□ -0
CCDC188H7C350 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.04■□□□□ -0
CCDC188H7C350 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.04■□□□□ -0
CCDC188H7C350 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.04■□□□□ -0
CCDC188H7C350 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.04■□□□□ -0
CCDC188H7C350 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CCDC188H7C350 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.04■□□□□ -0
CCDC188H7C350 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.04■□□□□ -0
CCDC188H7C350 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.04■□□□□ -0
CCDC188H7C350 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CCDC188H7C350 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.04■□□□□ -0
CCDC188H7C350 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.04■□□□□ -0
CCDC188H7C350 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CCDC188H7C350 AC002472.3-201ENST00000640124 621 ntBASIC15.04■□□□□ -0
CCDC188H7C350 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.04■□□□□ -0
CCDC188H7C350 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CCDC188H7C350 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 DLX4-206ENST00000611342 1662 ntBASIC15.03■□□□□ -0
CCDC188H7C350 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC15.03■□□□□ -0
CCDC188H7C350 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.03■□□□□ -0
CCDC188H7C350 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.03■□□□□ -0
CCDC188H7C350 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CCDC188H7C350 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCDC188H7C350 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC15.03■□□□□ -0
CCDC188H7C350 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CCDC188H7C350 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.03■□□□□ -0
CCDC188H7C350 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.03■□□□□ -0
CCDC188H7C350 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.03■□□□□ -0
CCDC188H7C350 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCDC188H7C350 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.03■□□□□ -0
CCDC188H7C350 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.03■□□□□ -0
CCDC188H7C350 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.03■□□□□ -0
CCDC188H7C350 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.03■□□□□ -0
CCDC188H7C350 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
CCDC188H7C350 AC145423.3-201ENST00000615987 467 ntBASIC15.03■□□□□ -0
CCDC188H7C350 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.03■□□□□ -0
CCDC188H7C350 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CCDC188H7C350 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCDC188H7C350 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.03■□□□□ -0
CCDC188H7C350 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC15.03■□□□□ -0
CCDC188H7C350 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CCDC188H7C350 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.03■□□□□ -0
CCDC188H7C350 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCDC188H7C350 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.03■□□□□ -0
CCDC188H7C350 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.03■□□□□ -0
CCDC188H7C350 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC188H7C350 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCDC188H7C350 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CCDC188H7C350 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.02■□□□□ -0
CCDC188H7C350 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.02■□□□□ -0
CCDC188H7C350 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 POM121L14P-201ENST00000406100 1558 ntBASIC15.02■□□□□ -0
CCDC188H7C350 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.02■□□□□ -0
CCDC188H7C350 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCDC188H7C350 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
CCDC188H7C350 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCDC188H7C350 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
CCDC188H7C350 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.02■□□□□ -0
CCDC188H7C350 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCDC188H7C350 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC188H7C350 BASP1P1-201ENST00000430708 665 ntBASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms