Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 AC091046.1-201ENST00000331871 207 ntBASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 AL353637.1-201ENST00000451571 732 ntBASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 AL133499.1-201ENST00000596207 608 ntBASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 AC012044.1-201ENST00000603431 297 ntBASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 AC079336.7-201ENST00000623428 1078 ntBASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 MIR193BHG-211ENST00000641433 5365 ntBASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NPIPA2E9PIF3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC078875.1-201ENST00000431907 724 ntBASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AL645933.1-201ENST00000440087 609 ntBASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 MAGEA5-201ENST00000446757 942 ntBASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 EEF1DP6-201ENST00000449232 372 ntBASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC006122.1-201ENST00000493323 440 ntBASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 IGLV3-15-201ENST00000518356 244 ntBASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 RTN3P1-201ENST00000536295 711 ntBASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 AF254983.2-201ENST00000612331 135 ntBASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA2E9PIF3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms