Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 MIR1247-201ENST00000408206 136 ntBASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 BCYRN1-201ENST00000418539 200 ntBASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 AC007969.1-201ENST00000433675 447 ntBASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 AC015818.8-201ENST00000587907 1519 ntBASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
DDX49Q9Y6V7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 AL031595.1-201ENST00000623969 4709 ntBASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC17.46■□□□□ 0.39
DDX49Q9Y6V7 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
DDX49Q9Y6V7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
DDX49Q9Y6V7 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms