Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PCDHB1Q9Y5F3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 AC006480.2-201ENST00000609770 1337 ntBASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 AC104073.2-201ENST00000453737 312 ntBASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 BNIP3P13-201ENST00000599968 566 ntBASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 LINC01230-201ENST00000625222 3017 ntBASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHB1Q9Y5F3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 RPL17P11-201ENST00000417593 544 ntBASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 AL161932.2-201ENST00000435436 679 ntBASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 AL596276.2-201ENST00000447525 331 ntBASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 AP000346.4-201ENST00000614827 381 ntBASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 AC100757.4-201ENST00000626934 759 ntBASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 AC004923.1-202ENST00000642106 209 ntBASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB1Q9Y5F3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.46□□□□□ -0.1
PCDHB1Q9Y5F3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms