Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 COX5BP8-201ENST00000416911 349 ntBASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 AP000812.2-201ENST00000538934 718 ntBASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 AP006547.1-201ENST00000563435 692 ntBASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 MIR6720-201ENST00000611664 98 ntBASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 RHOXF1P1-202ENST00000635473 501 ntBASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHA7Q9UN72 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.39■□□□□ 0.22
PCDHA7Q9UN72 PTENP1-202ENST00000532280 3996 ntBASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 KLF2P1-201ENST00000447438 1042 ntBASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 CROCCP4-201ENST00000457096 498 ntBASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 AC009955.4-201ENST00000597192 544 ntBASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 AC005014.1-201ENST00000432006 2976 ntBASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 MARK2P9-201ENST00000430958 1727 ntBASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 AC135782.3-201ENST00000562782 2105 ntBASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCDHA7Q9UN72 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 LAP3P2-201ENST00000454686 1454 ntBASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHA7Q9UN72 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms