Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 ISCA2P1-201ENST00000425548 448 ntBASIC14.45□□□□□ -0.1
SPASTQ9UBP0 AL157407.1-201ENST00000435784 904 ntBASIC14.45□□□□□ -0.1
SPASTQ9UBP0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 AL596276.2-201ENST00000447525 331 ntBASIC14.45□□□□□ -0.1
SPASTQ9UBP0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 MIR3907-201ENST00000579424 151 ntBASIC14.45□□□□□ -0.1
SPASTQ9UBP0 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 HINT2P1-201ENST00000419438 481 ntBASIC14.44□□□□□ -0.1
SPASTQ9UBP0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 AC078875.1-201ENST00000431907 724 ntBASIC14.44□□□□□ -0.1
SPASTQ9UBP0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms