Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 MBLAC2-202ENST00000514906 1936 ntBASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 AC005252.3-201ENST00000623855 2258 ntBASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 MAGEA5-201ENST00000446757 942 ntBASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 AC005077.2-201ENST00000449786 690 ntBASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 AC007663.3-201ENST00000609632 465 ntBASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 KRT8P29-201ENST00000420409 1371 ntBASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 AL359183.1-201ENST00000623796 2132 ntBASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.05□□□□□ -0.16
CUEDC1Q9NWM3 AC138969.2-201ENST00000532739 9932 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 AC152010.1-201ENST00000415779 2006 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 POM121L10P-201ENST00000436994 1285 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 AC012441.2-201ENST00000444843 739 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 RBM8B-201ENST00000555532 525 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 AL160314.3-201ENST00000556041 767 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 MIR3619-201ENST00000579667 83 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 AC022748.3-201ENST00000621828 275 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms