Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 SSR4P1-201ENST00000415143 412 ntBASIC13.03□□□□□ -0.32
CHD8Q9HCK8 CLK2P1-201ENST00000416636 1294 ntBASIC13.03□□□□□ -0.32
CHD8Q9HCK8 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 RN7SL832P-201ENST00000607781 1756 ntBASIC13.02□□□□□ -0.32
CHD8Q9HCK8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 AC007690.1-201ENST00000451924 468 ntBASIC13.02□□□□□ -0.32
CHD8Q9HCK8 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.02□□□□□ -0.32
CHD8Q9HCK8 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 AC067942.2-201ENST00000506227 1268 ntBASIC13.02□□□□□ -0.33
CHD8Q9HCK8 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 FTH1-205ENST00000529631 507 ntTSL 4 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 RN7SL827P-201ENST00000607480 288 ntBASIC13.02□□□□□ -0.33
CHD8Q9HCK8 AL133551.1-201ENST00000610279 1222 ntBASIC13.02□□□□□ -0.33
CHD8Q9HCK8 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHD8Q9HCK8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 RN7SL22P-201ENST00000471800 269 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 SRPK2P-201ENST00000523408 1100 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 OR4A49P-201ENST00000527050 632 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms