Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 XBP1P1-201ENST00000436573 652 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FAM86B3P-203ENST00000523992 854 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 AC005041.3-201ENST00000606287 649 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 AP000322.3-201ENST00000608665 388 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FAM90A21P-201ENST00000510875 1396 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FAM90A15P-201ENST00000514465 1395 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FAM90A6P-201ENST00000515148 1394 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FAM90A16P-201ENST00000526662 1395 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FAM90A9P-201ENST00000527940 1395 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FAM90A5P-201ENST00000528738 1395 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FAM90A14P-201ENST00000530386 1395 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FAM90A13P-201ENST00000534703 1395 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 AC067930.6-201ENST00000623257 4947 ntBASIC16.84■□□□□ 0.29
EFCC1Q9HA90 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EFCC1Q9HA90 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
EFCC1Q9HA90 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
EFCC1Q9HA90 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EFCC1Q9HA90 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EFCC1Q9HA90 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 ACTBP7-201ENST00000418351 1124 ntBASIC16.83■□□□□ 0.28
EFCC1Q9HA90 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
EFCC1Q9HA90 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms