Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 RN7SL736P-201ENST00000613111 269 ntBASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 AL359881.3-201ENST00000602640 1721 ntBASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 LINC01165-201ENST00000445190 1623 ntBASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.45■□□□□ 0.38
RPAP1Q9BWH6 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 AC074138.1-201ENST00000611182 1303 ntBASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPAP1Q9BWH6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 AC078991.1-201ENST00000437297 610 ntBASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 AC242376.2-201ENST00000619355 883 ntBASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 HSPA8P5-201ENST00000456928 2069 ntBASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPAP1Q9BWH6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms