Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 AC012441.1-201ENST00000446669 685 ntBASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 TSPY16P-201ENST00000449843 468 ntBASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 ALG3P1-201ENST00000508806 1114 ntBASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 AC027237.1-201ENST00000560942 655 ntBASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 AC134312.5-201ENST00000568031 1313 ntBASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 AP000593.2-201ENST00000542775 1433 ntBASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 AL359183.1-201ENST00000623796 2132 ntBASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HDHD3Q9BSH5 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 ARSEP1-201ENST00000420443 635 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AL161932.2-201ENST00000435436 679 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 NCLP1-201ENST00000445357 1963 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 CYMP-203ENST00000474680 1263 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AC106760.1-201ENST00000508690 800 ntBASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HDHD3Q9BSH5 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms