Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 MROH4P-201ENST00000431302 1578 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 AP000593.2-201ENST00000542775 1433 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 AC008033.3-201ENST00000612531 1407 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 MTX1P1-201ENST00000440904 838 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 AL590640.2-201ENST00000457038 527 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 RPL13AP20-201ENST00000459725 609 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 HAUS1P1-201ENST00000505275 832 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 FAM86HP-204ENST00000513466 959 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 MKKS-203ENST00000609375 882 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 AC020978.9-201ENST00000624380 1141 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 REXO1L4P-201ENST00000605109 1937 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.17□□□□□ -0.3
USB1Q9BQ65 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 CICP16-201ENST00000502609 2813 ntBASIC13.17□□□□□ -0.3
USB1Q9BQ65 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USB1Q9BQ65 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 MTCYBP32-201ENST00000427945 1084 ntBASIC13.16□□□□□ -0.3
USB1Q9BQ65 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 WBP1LP6-201ENST00000438434 424 ntBASIC13.16□□□□□ -0.3
USB1Q9BQ65 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 MTND2P3-201ENST00000452458 470 ntBASIC13.16□□□□□ -0.3
USB1Q9BQ65 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USB1Q9BQ65 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.16□□□□□ -0.3
USB1Q9BQ65 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms