Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 AC107918.4-201ENST00000641966 3141 ntBASIC13.66□□□□□ -0.22
TREX2Q9BQ50 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREX2Q9BQ50 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 Z93015.1-201ENST00000451718 390 ntBASIC13.65□□□□□ -0.22
TREX2Q9BQ50 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AC106820.3-201ENST00000561653 397 ntBASIC13.65□□□□□ -0.22
TREX2Q9BQ50 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AL008638.5-201ENST00000623814 1298 ntBASIC13.65□□□□□ -0.22
TREX2Q9BQ50 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AC089987.1-201ENST00000551654 2209 ntBASIC13.65□□□□□ -0.22
TREX2Q9BQ50 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREX2Q9BQ50 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.65□□□□□ -0.22
TREX2Q9BQ50 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
TREX2Q9BQ50 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
TREX2Q9BQ50 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TREX2Q9BQ50 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TREX2Q9BQ50 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TREX2Q9BQ50 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.64□□□□□ -0.23
TREX2Q9BQ50 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.64□□□□□ -0.23
TREX2Q9BQ50 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TREX2Q9BQ50 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms