Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC025048.3-201ENST00000590609 569 ntBASIC11.02□□□□□ -0.65
AP1S3Q96PC3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 AC005702.4-201ENST00000618393 416 ntBASIC11.02□□□□□ -0.65
AP1S3Q96PC3 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 ABCC5-202ENST00000334444 5921 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
AP1S3Q96PC3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AL365181.3-201ENST00000605886 3222 ntBASIC11.01□□□□□ -0.65
AP1S3Q96PC3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 KRT8P22-201ENST00000562317 1415 ntBASIC11.01□□□□□ -0.65
AP1S3Q96PC3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AL627223.1-201ENST00000416693 442 ntBASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AC004945.1-201ENST00000416738 983 ntBASIC11.01□□□□□ -0.65
AP1S3Q96PC3 KRT18P64-201ENST00000434946 1219 ntBASIC11.01□□□□□ -0.65
AP1S3Q96PC3 RBPMS2P1-201ENST00000437762 623 ntBASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 MTDHP5-201ENST00000598980 586 ntBASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AC074044.1-201ENST00000609673 707 ntBASIC11.01□□□□□ -0.65
AP1S3Q96PC3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AL033527.5-202ENST00000641632 1098 ntBASIC11.01□□□□□ -0.65
AP1S3Q96PC3 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 BEND3P3-201ENST00000611030 2440 ntBASIC11.01□□□□□ -0.65
AP1S3Q96PC3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms