Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 AC092580.1-201ENST00000433998 658 ntBASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 AC021723.1-201ENST00000486306 515 ntBASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 AC005730.2-201ENST00000564549 1184 ntBASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 AC022748.3-201ENST00000621828 275 ntBASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AC107918.4-201ENST00000641966 3141 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 CICP20-201ENST00000443330 2801 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 MIR658-201ENST00000385210 100 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 BTBD6P1-201ENST00000412176 1267 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 POM121L10P-201ENST00000436994 1285 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 GOLGA2P4-201ENST00000441462 777 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 RN7SL560P-201ENST00000577943 264 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AL096828.3-201ENST00000615354 462 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 CR392039.2-201ENST00000623182 509 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 AC018629.1-201ENST00000623381 1736 ntBASIC14.06□□□□□ -0.16
PDLIM5Q96HC4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms