Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-CQ95604 RPL13AP3-202ENST00000494676 1473 ntBASIC14.69□□□□□ -0.06
HLA-CQ95604 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-CQ95604 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HLA-CQ95604 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HLA-CQ95604 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HLA-CQ95604 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
HLA-CQ95604 CICP23-201ENST00000605013 2741 ntBASIC14.69□□□□□ -0.06
HLA-CQ95604 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 RPS20P25-201ENST00000412447 352 ntBASIC14.69□□□□□ -0.06
HLA-CQ95604 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-CQ95604 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HLA-CQ95604 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-CQ95604 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 B9D1-206ENST00000461069 923 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 AC117500.1-201ENST00000497352 755 ntBASIC14.69□□□□□ -0.06
HLA-CQ95604 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC14.69□□□□□ -0.06
HLA-CQ95604 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-CQ95604 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-CQ95604 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-CQ95604 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-CQ95604 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-CQ95604 TBC1D27-202ENST00000424239 1573 ntBASIC14.68□□□□□ -0.06
HLA-CQ95604 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-CQ95604 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 AC046158.3-201ENST00000624947 2558 ntBASIC14.68□□□□□ -0.06
HLA-CQ95604 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
HLA-CQ95604 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 RN7SKP212-201ENST00000410851 328 ntBASIC14.68□□□□□ -0.06
HLA-CQ95604 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-CQ95604 RPL18AP16-201ENST00000424057 531 ntBASIC14.68□□□□□ -0.06
HLA-CQ95604 FDPSP7-201ENST00000429043 1054 ntBASIC14.68□□□□□ -0.06
HLA-CQ95604 AC006328.1-201ENST00000437571 379 ntBASIC14.68□□□□□ -0.06
HLA-CQ95604 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 AL136084.1-201ENST00000449172 318 ntBASIC14.68□□□□□ -0.06
HLA-CQ95604 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 AC099328.1-201ENST00000498809 1030 ntBASIC14.68□□□□□ -0.06
HLA-CQ95604 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-CQ95604 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-CQ95604 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 MIR4640-201ENST00000581824 90 ntBASIC14.68□□□□□ -0.06
HLA-CQ95604 CLPP-205ENST00000596605 646 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 BX322562.1-201ENST00000617004 561 ntBASIC14.68□□□□□ -0.06
HLA-CQ95604 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-CQ95604 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-CQ95604 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-CQ95604 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-CQ95604 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms