Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC007389.4-201ENST00000454674 793 ntBASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 COX5BP1-201ENST00000507622 393 ntBASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 RN7SL713P-201ENST00000582127 302 ntBASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC008735.3-201ENST00000596646 500 ntBASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AL355385.1-201ENST00000606123 409 ntBASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AC027601.3-201ENST00000622907 509 ntBASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 KRT8P4-201ENST00000509735 1454 ntBASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATG4AQ8WYN0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 NCLP1-201ENST00000445357 1963 ntBASIC15□□□□□ -0.01
ATG4AQ8WYN0 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 MEX3B-202ENST00000558133 4333 ntBASIC15□□□□□ -0.01
ATG4AQ8WYN0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 BAP1-211ENST00000615113 489 ntBASIC15□□□□□ -0.01
ATG4AQ8WYN0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 AC027612.1-201ENST00000445234 2395 ntBASIC15□□□□□ -0.01
ATG4AQ8WYN0 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 AC131212.3-201ENST00000624087 4219 ntBASIC15□□□□□ -0.01
ATG4AQ8WYN0 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 AC073869.1-201ENST00000415574 2762 ntBASIC15□□□□□ -0.01
ATG4AQ8WYN0 AC068760.1-201ENST00000493579 1953 ntBASIC15□□□□□ -0.01
ATG4AQ8WYN0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ATG4AQ8WYN0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ATG4AQ8WYN0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ATG4AQ8WYN0 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms