Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 AC087386.2-201ENST00000623212 4637 ntBASIC14.18□□□□□ -0.14
ATL1Q8WXF7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 E2F3P2-201ENST00000447755 1422 ntBASIC14.18□□□□□ -0.14
ATL1Q8WXF7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 AC099336.1-201ENST00000417053 1171 ntBASIC14.18□□□□□ -0.14
ATL1Q8WXF7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 AC012441.2-201ENST00000444843 739 ntBASIC14.18□□□□□ -0.14
ATL1Q8WXF7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 HILS1-202ENST00000545329 423 ntBASIC14.18□□□□□ -0.14
ATL1Q8WXF7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 RBM8B-201ENST00000555532 525 ntBASIC14.18□□□□□ -0.14
ATL1Q8WXF7 AC100827.2-201ENST00000563214 1194 ntBASIC14.18□□□□□ -0.14
ATL1Q8WXF7 AC009955.4-201ENST00000597192 544 ntBASIC14.18□□□□□ -0.14
ATL1Q8WXF7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 PEG13-201ENST00000631594 5667 ntBASIC14.18□□□□□ -0.14
ATL1Q8WXF7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ATL1Q8WXF7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 MBLAC2-202ENST00000514906 1936 ntBASIC14.17□□□□□ -0.14
ATL1Q8WXF7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 AL157407.1-201ENST00000435784 904 ntBASIC14.17□□□□□ -0.14
ATL1Q8WXF7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.17□□□□□ -0.14
ATL1Q8WXF7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 HSPA8P5-201ENST00000456928 2069 ntBASIC14.17□□□□□ -0.14
ATL1Q8WXF7 AL359881.3-201ENST00000602640 1721 ntBASIC14.17□□□□□ -0.14
ATL1Q8WXF7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATL1Q8WXF7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.16□□□□□ -0.14
ATL1Q8WXF7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ATL1Q8WXF7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATL1Q8WXF7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATL1Q8WXF7 AC015818.8-201ENST00000587907 1519 ntBASIC14.16□□□□□ -0.14
ATL1Q8WXF7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.16□□□□□ -0.14
ATL1Q8WXF7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATL1Q8WXF7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATL1Q8WXF7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms