Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 BEND3P3-201ENST00000611030 2440 ntBASIC12.6□□□□□ -0.39
CCDC107Q8WV48 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 AC019294.4-201ENST00000561777 2905 ntBASIC12.6□□□□□ -0.39
CCDC107Q8WV48 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 AL645937.2-201ENST00000396808 931 ntBASIC12.6□□□□□ -0.39
CCDC107Q8WV48 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 NUS1P3-201ENST00000423502 862 ntBASIC12.6□□□□□ -0.39
CCDC107Q8WV48 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 UGT1A2P-201ENST00000454886 866 ntBASIC12.6□□□□□ -0.39
CCDC107Q8WV48 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 AC092183.1-201ENST00000469884 875 ntBASIC12.6□□□□□ -0.39
CCDC107Q8WV48 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 RNA5SP421-201ENST00000516864 134 ntBASIC12.6□□□□□ -0.39
CCDC107Q8WV48 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 BRI3BPP1-201ENST00000594224 787 ntBASIC12.6□□□□□ -0.39
CCDC107Q8WV48 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.6□□□□□ -0.39
CCDC107Q8WV48 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 SLC7A15P-201ENST00000424028 1363 ntBASIC12.59□□□□□ -0.39
CCDC107Q8WV48 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC093004.1-201ENST00000508850 424 ntBASIC12.59□□□□□ -0.39
CCDC107Q8WV48 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC055876.2-201ENST00000531834 546 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms