Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCER1Q8TC90 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCER1Q8TC90 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCER1Q8TC90 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCER1Q8TC90 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCER1Q8TC90 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCER1Q8TC90 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCER1Q8TC90 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCER1Q8TC90 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CCER1Q8TC90 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 HARS-202ENST00000415192 1401 ntTSL 2 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 AC019294.4-201ENST00000561777 2905 ntBASIC21.63■■□□□ 1.05
CCER1Q8TC90 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 RPL28-203ENST00000428193 573 ntTSL 2 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 RPL28-204ENST00000431533 590 ntTSL 2 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 AP001889.1-201ENST00000525414 633 ntBASIC21.63■■□□□ 1.05
CCER1Q8TC90 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 RPL28-207ENST00000558815 616 ntTSL 2 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 AC025279.2-201ENST00000569730 653 ntBASIC21.63■■□□□ 1.05
CCER1Q8TC90 AL096865.1-201ENST00000606796 927 ntBASIC21.63■■□□□ 1.05
CCER1Q8TC90 AC002472.3-201ENST00000640124 621 ntBASIC21.63■■□□□ 1.05
CCER1Q8TC90 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC21.63■■□□□ 1.05
CCER1Q8TC90 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCER1Q8TC90 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
CCER1Q8TC90 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCER1Q8TC90 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.62■■□□□ 1.05
CCER1Q8TC90 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC21.62■■□□□ 1.05
CCER1Q8TC90 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC21.62■■□□□ 1.05
CCER1Q8TC90 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CCER1Q8TC90 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC21.62■■□□□ 1.05
CCER1Q8TC90 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CCER1Q8TC90 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CCER1Q8TC90 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCER1Q8TC90 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCER1Q8TC90 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 AC027612.1-201ENST00000445234 2395 ntBASIC21.61■■□□□ 1.05
CCER1Q8TC90 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCER1Q8TC90 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCER1Q8TC90 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCER1Q8TC90 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC21.61■■□□□ 1.05
CCER1Q8TC90 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.61■■□□□ 1.05
CCER1Q8TC90 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCER1Q8TC90 SPCS2P1-201ENST00000561636 679 ntBASIC21.61■■□□□ 1.05
CCER1Q8TC90 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC21.61■■□□□ 1.05
CCER1Q8TC90 AC104506.1-201ENST00000609247 429 ntBASIC21.61■■□□□ 1.05
CCER1Q8TC90 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC21.61■■□□□ 1.05
CCER1Q8TC90 AC132938.4-201ENST00000623835 848 ntBASIC21.61■■□□□ 1.05
CCER1Q8TC90 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.61■■□□□ 1.05
CCER1Q8TC90 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
CCER1Q8TC90 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms