Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 PMF1-201ENST00000368273 884 ntTSL 2 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 MIR193A-201ENST00000384882 88 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 AP001102.1-201ENST00000528959 409 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 DUX4L33-201ENST00000635217 958 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 AC015813.5-201ENST00000624641 1514 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 RN7SL832P-201ENST00000607781 1756 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 NOS2P3-201ENST00000411468 867 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 NOS2P2-201ENST00000426269 867 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 AC105443.1-201ENST00000433754 712 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 JPT1-205ENST00000470924 663 ntTSL 5 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 RN7SL87P-201ENST00000497657 288 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 RN7SL162P-201ENST00000579233 292 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 MIR5193-201ENST00000584510 109 ntBASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC18.41■□□□□ 0.54
COL22A1Q8NFW1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 TP73-207ENST00000378290 1831 ntTSL 2 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 AC007881.1-201ENST00000437460 187 ntBASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 TPT1P11-201ENST00000458482 498 ntBASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 RN7SL363P-201ENST00000482412 273 ntBASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 AC091691.1-201ENST00000583587 1018 ntBASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 MIR6165-201ENST00000614803 84 ntBASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 AGAP7P-201ENST00000582299 2062 ntBASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 AGAP14-201ENST00000624701 2060 ntBASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 AC002350.2-201ENST00000623894 1828 ntBASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL22A1Q8NFW1 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL22A1Q8NFW1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 AC074019.1-201ENST00000428788 1096 ntBASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 RBPMSLP-201ENST00000433427 502 ntBASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 AC022382.1-201ENST00000602768 336 ntBASIC18.39■□□□□ 0.53
COL22A1Q8NFW1 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms