Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 AC095040.1-201ENST00000513286 675 ntBASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 SORD2P-201ENST00000558556 1069 ntBASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 NDUFB10P1-201ENST00000567319 521 ntBASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 AC002044.2-201ENST00000624910 970 ntBASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPAS3Q8IXF0 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 AC018529.2-202ENST00000611482 3087 ntBASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 AL161932.2-201ENST00000435436 679 ntBASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 RPL35P9-201ENST00000446059 350 ntBASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NPAS3Q8IXF0 RN7SL396P-201ENST00000471086 295 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms