Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KCNIP4Q6PIL6 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KCNIP4Q6PIL6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.27□□□□□ -0.61
KCNIP4Q6PIL6 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
KCNIP4Q6PIL6 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 AC025181.2-201ENST00000606994 802 ntBASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 BX640515.1-201ENST00000617215 977 ntBASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 KRT8P35-201ENST00000483942 1338 ntBASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 DNM1P41-201ENST00000623634 3350 ntBASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 AC110048.1-201ENST00000604293 2157 ntBASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
KCNIP4Q6PIL6 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 AL133267.1-201ENST00000398220 340 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 IGLL3P-201ENST00000412472 434 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 AC003958.1-201ENST00000435883 421 ntBASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.25□□□□□ -0.61
KCNIP4Q6PIL6 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms