Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 DGCR5-201ENST00000399539 862 ntBASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 WFDC1-204ENST00000613603 549 ntBASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 AC023090.2-201ENST00000625182 2110 ntBASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 AC025048.6-201ENST00000634326 1161 ntBASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms