Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CREB3L3Q68CJ9 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CREB3L3Q68CJ9 AC104581.4-201ENST00000623126 3052 ntBASIC17.14■□□□□ 0.33
CREB3L3Q68CJ9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CREB3L3Q68CJ9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CREB3L3Q68CJ9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
CREB3L3Q68CJ9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.14■□□□□ 0.33
CREB3L3Q68CJ9 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.14■□□□□ 0.33
CREB3L3Q68CJ9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CREB3L3Q68CJ9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.14■□□□□ 0.33
CREB3L3Q68CJ9 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 AC007663.3-201ENST00000609632 465 ntBASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 AL591471.1-201ENST00000621855 229 ntBASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 AHCYP4-201ENST00000419201 1315 ntBASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 TUBB1P2-201ENST00000422712 1306 ntBASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 TUBB1P1-201ENST00000503144 1300 ntBASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 AC072061.1-201ENST00000569710 2234 ntBASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 FAM90A12P-201ENST00000519497 2375 ntBASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 FAM90A24P-201ENST00000520792 2369 ntBASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CREB3L3Q68CJ9 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 AP002353.1-201ENST00000528257 1599 ntBASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 POM121L10P-201ENST00000436994 1285 ntBASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 AC104073.2-201ENST00000453737 312 ntBASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 AC068587.8-201ENST00000641239 219 ntBASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.12■□□□□ 0.33
CREB3L3Q68CJ9 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms