Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
LYSMD4Q5XG99 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AL109954.1-202ENST00000564051 2148 ntBASIC14□□□□□ -0.17
LYSMD4Q5XG99 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AC064801.2-201ENST00000625052 1303 ntBASIC14□□□□□ -0.17
LYSMD4Q5XG99 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 PRSS3P1-201ENST00000503996 742 ntBASIC14□□□□□ -0.17
LYSMD4Q5XG99 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AL160191.2-201ENST00000603975 601 ntBASIC14□□□□□ -0.17
LYSMD4Q5XG99 AC104506.1-201ENST00000609247 429 ntBASIC14□□□□□ -0.17
LYSMD4Q5XG99 HPX-213ENST00000615166 826 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AC091769.1-201ENST00000619576 568 ntBASIC14□□□□□ -0.17
LYSMD4Q5XG99 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AC092053.3-201ENST00000641308 4975 ntBASIC14□□□□□ -0.17
LYSMD4Q5XG99 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LYSMD4Q5XG99 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
LYSMD4Q5XG99 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 PAUPAR-201ENST00000630360 2965 ntBASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 AC091951.1-201ENST00000512854 2465 ntBASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms