Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 AC016397.2-201ENST00000624848 1985 ntBASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 AC126335.2-201ENST00000623362 4637 ntBASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 AC044849.1-201ENST00000519737 1188 ntBASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 AC068587.8-201ENST00000641239 219 ntBASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TTC39BQ5VTQ0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 AC090505.1-201ENST00000430515 1834 ntBASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TTC39BQ5VTQ0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 AL008707.1-201ENST00000422498 534 ntBASIC15.08■□□□□ 0
TTC39BQ5VTQ0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 KLF2P1-201ENST00000447438 1042 ntBASIC15.08■□□□□ 0
TTC39BQ5VTQ0 RPL18P13-201ENST00000478088 569 ntBASIC15.08■□□□□ 0
TTC39BQ5VTQ0 ZNF767P-206ENST00000513792 565 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms